Whole Wheat Greek Yogurt Pizza Crust is a healthy thin crust pizza recipe that’s made with 100% whole wheat flour, Greek yogurt and a hint of honey.

Whole Wheat Greek Yogurt Pizza Crust

Almost every time I ask Baker what he wants for dinner, his answer is pizza! I can’t blame the kid, I could eat pizza every night for dinner too! Pizza is perfect in so many ways because you can make it a million different ways. From the thickness of the crust to your choice of toppings, the options are endless.

Brandon makes the best pizza, but his dough takes days to rise and special Italian flour to create the perfect crust. So the other day when Baker requested pizza for dinner, I decided to create a healthier crust that I could quickly make and would be easy for the boys to eat and enjoy.

We were all so pleased with how tasty these individual whole wheat Greek yogurt pizza crusts baked up.

Whole Wheat Greek Yogurt Pizza Crust

Crisp around the edges with a slight bubble throughout and a soft chew in every bite.

Cutting the dough into small rounds makes them perfect for pizza night so everyone can top their own. Yummy fun!

Whole Wheat Greek Yogurt Pizza Crust

Healthy & everyone’s happy! What more could you ask for?!



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Whole Wheat Greek Yogurt Pizza Crust

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  • Author: Maegan - The BakerMama
  • Prep Time: 45 mins
  • Cook Time: 20 mins
  • Total Time: 1 hour 5 mins
  • Yield: 6
  • Category: Main


Whole Wheat Greek Yogurt Pizza Crust is a healthy thin crust pizza recipe that’s made with 100% whole wheat flour, Greek yogurt and a hint of honey.


  • 1 envelope (2-1/4 teaspoons) active dry yeast
  • 1 teaspoon sugar
  • 3/4 cup warm water
  • 21/2 cups whole wheat flour
  • 1 teaspoon salt
  • 1 tablespoon honey
  • 1/2 cup plain Greek yogurt
  • Toppings of your choice!


  1. In a small bowl, stir together the yeast, sugar and warm water. Let proof 5-10 minutes.
  2. In a large bowl, whisk together the flour and salt. Make a well in the center and add the yeast mixture, honey and yogurt. Stir together with a wooden spoon and then knead with your hands until a smooth ball forms, about 2-4 minutes. Place in an oiled bowl and cover with a towel for about 30 minutes.
  3. Preheat oven to 450°F. Once dough has rested, roll out to 1/4-inch thickness on a lightly floured surface. Cut dough into 6-inch round circles. Gather remaining dough and roll out again to cut out additional circles. You should have 6 rounds.
  4. Place dough rounds on lightly greased baking sheets and top each one with a tablespoon of pizza sauce, a sprinkle of cheese, pepperoni and more cheese. Bake for 15-20 minutes or until crust is crisp around the edges and cheese is bubbly and browned on top. Serve as an individual pizza or cut into 4 slices each and serve to a crowd.

About The BakerMama

Maegan is the author of her best-selling Beautiful Boards, Spectacular Spreads and Brilliant Bites cookbooks. She started blogging in 2012 and features hundreds of original recipes on The BakerMama. She truly enjoys sharing her easy, family-friendly recipes, creative meal ideas, food board creations, and entertaining spreads to encourage others to get in the kitchen and make something memorable for their loved ones to enjoy together. Learn More

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    1. Hi Mo! If it’s an all-purpose gluten free flour, it should work well. Certainly worth a try. Enjoy!

  1. This is the pizza that I am going to have and serve my friend’s kids, tomorrow morning. This is the best recipe that I found today.

  2. These were absolutely perfect and easy to make! My boyfriend loved them, I am using this recipe from now on, thank you!

    1. Hi Jenny! We most often use just crushed San Marzano tomatoes from a can as the sauce. I sometimes use Muir Glen canned pizza sauce too. Both are great! Enjoy!

    1. Hi Traci! I haven’t tried to freeze them yet, but they should freeze great. I’d go ahead and roll out the dough and then freeze them in resealable freezer bags. Great idea! I think I’ll try it soon so we have a stock in the freezer for last-minute meals. Enjoy!